Application Notes
3D Observation of Cleared Mouse Liver Using the FLUOVIEW FV3000 Microscope
Three-Dimensional Observation of Liver with High Resolution
3D observation of thick tissue specimens usually requires a two-photon excitation microscope due to the increased absorption and scattering of light that occurs when imaging deeper into the tissue sample. While the liver is typically a highly-scattering tissue, the use of clearing methods combined with the appropriate optics can enable thick tissue 3D observation using the FV3000 confocal microscope. In this experiment, the Olympus 30x silicone oil immersion objective with a numerical aperture (NA) of 1.05 and a working distance (WD) of 0.8 mm enabled high resolution 3D observation of the biliary tree structure in cleared mouse liver samples.
Experiment Summary
Optical Clearing of Mice Liver Tissue Specimens
Liver tissue collected from a mouse
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The tissue is stained for fluorescence by immunostaining
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The liver tissue is cleared using SeeDB
Courtesy of: K. Kamimoto, K. Kaneko, CY. Kok, H. Okada, A. Miyajima, and T. Itoh, "Heterogeneity and stochastic growth regulation of biliary epithelial cells dictate dynamic epithelial tissue remodeling," Elife, 2016 Jul. 19;5, pii: e15034, doi: 10.7554/eLife.15034.
Experiment protocol for visualizing a complex biliary network in 3D. Following tissue collection, biliary tissues undergo immunostaining to visualize a complex biliary network in three dimensions. The immunostained specimens are then cleared using SeeDB1).
1) Reference:Ke MT, S. Fujimoto, and T. Imai, "SeeDB: a simple and morphology-preserving optical clearing agent for neuronal circuit reconstruction," Nat Neurosci, 2013 Aug; 16 (8): 1154–61, doi: 10.1038/nn.3447, Epub 2013 Jun. 23, PMID: 23792946
Three-Dimensional Observation of Biliary Tree Structures in Injured Mouse Liver with a 20x Objective (UPLSAPO20X (NA: 0.75, WD: 0.6 mm))
Three-Dimensional Observation of Biliary Tree Structures in Mouse Liver with a 30x Objective (UPLSAO30XS (NA: 1.05, WD: 0.8 mm))
Control mouse
Klf5-LKO mouse
Movie: The biliary tree structure of the control mouse
Comment from Dr. Okada:
Three-Dimensional Visualization and Fine Structural Analysis of Complex Biliary Structures
Dr. Hajime Okada
Comment from Dr. Itoh:
Three-Dimensional Imaging of Cleared Livers2)
Dr. Tohru Itoh
Project Associate Professor
Until now, medical and biochemical research on the liver has mostly relied on conventional 2D observation methods using tissue sections instead of whole intact organs. Using these methods, however, it is challenging to detect and understand the “true colors” of the liver under physiological conditions and various conditions of liver diseases.
Our research group developed new visualization technology for staining and clearing liver tissues, with which the 3D observation of the biliary structure in intact mouse livers was successfully realized for the first time. This combination of clearing and staining technology enabled us to detect dynamic biliary structural changes (biliary remodeling) and conduct research on its regulatory mechanisms and physiological functions. In those experiments presented above, we successfully established an experimental system for effective visualization of a 3D biliary structure using the SeeDB clearing reagent and a confocal microscope. By using an FV3000 microscope, some of the molecular mechanisms for biliary remodeling were clarified.
With the techniques presented here, a confocal microscope is useful for 3D analysis of dynamic changes of various tissues and cells in the liver, including the biliary structure. We expect that our new visualization technology can contribute to the development of diagnostics and therapies for liver diseases and regenerative medicine through a better understanding of the process of development and regeneration from the viewpoint of tissue remodeling and inter-cellular interactions.
2) References:
H. Okada, M. Yamada, K. Kamimoto, CY. Kok, K. Kaneko, M. Ema, A. Miyajima, and T. Itoh, "The transcription factor Klf5 is essential for intrahepatic biliary epithelial tissue remodeling after cholestatic liver injury," J Biol Chem., 2018 Apr. 27;293(17):6214-6229, doi: 10.1074/jbc. RA118.002372, Epub 2018 Mar. 9.
K. Kamimoto, K. Kaneko, CY. Kok, H. Okada, A. Miyajima, and T. Itoh, "Heterogeneity and stochastic growth regulation of biliary epithelial cells dictate dynamic epithelial tissue remodeling," Elife, 2016 Jul. 19;5, pii: e15034, doi: 10.7554/eLife.15034.
K. Kaneko, K. Kamimoto, A. Miyajima, and T. Itoh, "Adaptive remodeling of the biliary architecture underlies liver homeostasis," Hepatology, 2015 Jun.;61(6):2056-66, doi: 10.1002/hep.27685, Epub 2015 Apr. 22.
How the FV3000 Confocal Microscope Facilitated Our Experiment
Fully Spectral System Provides High Sensitivity
Silicone Immersion Objectives for Live Cell Imaging Deliver High-resolution Obseravation at Depth
Acknowledgments
This application note was prepared with the help of the following researchers:
Division of Mammalian Development, Genetic Strains Research Center, National Institute of Genetics, Dr. Hajime Okada
Laboratory of Stem Cell Therapy, Institute for Quantitative Biosciences, The University of Tokyo, Project Associate Professor, Dr. Tohru Itoh
Products related to this application
https://main--eds-evident-website--evident-scientific.hlx.live/en/laser-scanning/fv4000/
Confocal Laser Scanning Microscope
FV4000
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Super Apochromat Objectives
UPLSAPO-S/UPLSAPO-W
These super apochromat objectives provide spherical and chromatic aberration compensation and high transmission from the visible to the near infrared. Using silicone oil or water immersion media, which have refractive indexes closely matching that of live cells, they achieve high-resolution imaging deep in living tissue.
- Compensate for both spherical and chromatic aberrations and high transmission from the visible to the near-infrared region
- Silicone oil or water immersion media help achieve high-resolution imaging deep in living tissue and reduce spherical aberration as their refractive indexes closely match that of live cells